All journal publications

Found 506 results. Export: Tagged | XML
2013
Driessen, R.P., Dame, R.T. , Structure and dynamics of the crenarchaeal nucleoid, Biochemical Society Transactions, vol. 41, no. 1.
Driessen, R.P.C., Meng, H., Suresh, G., Shahapure, R., Lanzani, G., Priyakumar, U.D., Schiessel, H., van Noort, J., Dame, R.T. , Crenarchaeal chromatin proteins Cren7 and Sul7 compact DNA by inducing rigid bends, Nucleic Acids Research, vol. 41, no. 1, pp. 196-205.
Chintakayala, K., Singh, S.S., Rossiter, A.E., Shahapure, R., Dame, R.T., Grainger, D.C. , E. coli Fis protein insulates the cbpA gene from uncontrolled transcription., PLOS Genetics, vol. 9, no. 1, pp. e1003152.
Lanz, H.L., Zimmerman, R.M., Brouwer, J., Noteborn, M.H., Backendorf, C. , Mitotic catastrophe triggered in human cancer cells by the viral protein apoptin, Cell Death & Disease, vol. 4, pp. e487. DOI
2012
Lanz, H.L., Suijker, J., Noteborn, M.H., Backendorf, C. , Proteasomal insensitivity of apoptin in tumor cells, Biochemical and biophysical research communications, vol. 422, no. 1, pp. 169-73. DOI
Westra, E.R., van Erp, P.B., Kunne, T., Wong, S.P., Staals, R.H., Seegers, C.L., Bollen, S., Jore, M.M., Semenova, E., Severinov, K., de Vos, W.M., Dame, R.T., de Vries, R., Brouns, S.J., van der Oost, J. , CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3, Molecular Cell, vol. 46, no. 5, pp. 595-605.
Vermeij, W.P., Florea, B. I, Isenia, S., Alia, A., Brouwer, J., Backendorf, C. , Proteomic Identification of in Vivo Interactors Reveals Novel Function of Skin Cornification Proteins, Journal of Proteome Research, vol. 11, no. 6, pp. 3068-3076. DOI
Vreede, J., Dame, R.T. , Predicting the effect of ions on the conformation of the H-NS dimerization domain, Biophysical Journal, vol. 103, no. 1, pp. 89-98.
Lanz, H.L., Florea, B. I, Noteborn, M.H., Backendorf, C. , Development and application of an in vitro apoptin kinase assay, Analytical Biochemistry, vol. 421, no. 1, pp. 68-74. DOI
Porta, F., Lamers, G.E., Morrhayim, J., Chatzopoulou, A., Schaaf, M., den Dulk, H., Backendorf, C., Zink, J. I, Kros, A. , Folic Acid-Modified Mesoporous Silica Nanoparticles for Cellular and Nuclear Targeted Drug Delivery, Advanced healthcare materials. DOI
Osman, T.A.M., Olsthoorn, R.C.L., Livieratos, I.C. , In vitro template-dependent synthesis of Pepino mosaic virus positive- and negative-strand RNA by its RNA-dependent RNA polymerase, Virus Research, vol. 167, no. 2, pp. 267-272.
Liu, Z., Galli, F., Waterreus, W.J., Meulenbroek, E., Koning, R. I, Lamers, G.E., Olsthoorn, R.C., Pannu, N., Oosterkamp, T.H., Koster, A.J., Dame, R.T., Abrahams, J.P. , Single-walled carbon nanotubes as scaffolds to concentrate DNA for the study of DNA-protein interactions, Chemphyschem, vol. 13, no. 6, pp. 1569-75.
Laurens, N., Driessen, R.P.C., Heller, I, Vorselen, D., Noom, M.C., Hol, F.J., White, M.F., Dame, R.T., Wuite, G.J. , Alba shapes the archaeal genome using a delicate balance of bridging and stiffening the DNA, Nature Communications, vol. 3, issue 1328, no. 1.
Westra, E.R., Nilges, B., van Erp, P.B., van der Oost, J., Dame, R.T., Brouns, S.J. , Cascade-mediated binding and bending of negatively supercoiled DNA, RNA biology, vol. 9, issue 9, pp. 1-5.
Tavita, K., Mikkel, K., Tark-Dame, M., Jerabek, H., Teras, R., Sidorenko, J., Tegova, R., Tover, A., Dame, R.T., Kivisaar, M. , Homologous recombination in bacteria is facilitated by starvation and affected by local genome accessibility, Mutation Research, vol. 737, issue 1-2, pp. 12-24.
Dame, R.T., Espeli, O., Grainger, D.C., Wiggins, P.A. , Multidisciplinary perspectives on bacterial genome organization and dynamics, Molecular Microbiology, vol. 86, issue 5, no. 4, pp. 1023-30.
Zimmerman, R., Peng, D.J., Lanz, H., Zhang, Y.H., Danen-Van Oorschot, A., Qu, S., Backendorf, C., Noteborn, M. , PP2A inactivation is a crucial step in triggering apoptin-induced tumor-selective cell killing, Cell death & disease, vol. 3, pp. e291. DOI
2011
Sznee, K., Dekker, J.P., Dame, R.T., van Roon, H., Wuite, G.J., Frese, R.N. , Jumping mode atomic force microscopy on grana membranes from spinach, The Journal of biological chemistry, vol. 286, no. 45, pp. 39164-71. DOI
Yu, C.H., Noteborn, M.H., Pleij, C.W., Olsthoorn, R.C. , Stem-loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting, Nucleic acids research, vol. 39, no. 20, pp. 8952-9. DOI
Goosen, N., Wagner, K., Moolenaar, G.F. , Role of the insertion domain and the zinc-finger motif of Escherichia coli UvrA in damage recognition and ATP hydrolysis, DNA Repair, vol. 10, no. 5, pp. 483-496. DOI
Jin, J.L., Gong, J., Yin, T.J., Lu, Y.J., Xia, J.J., Xie, Y.Y., Di, Y., He, L., Guo, J.L., Sun, J., Noteborn, M.H., Qu, S. , PTD4-apoptin protein and dacarbazine show a synergistic antitumor effect on B16-F1 melanoma in vitro and in vivo, European journal of pharmacology, vol. 654, no. 1, pp. 17-25. DOI
Olsthoorn, R.C.L., Girard, G., Gultyaev, A.P. , Upstream start codon in segment 4 of North American H2 avian influenza A viruses, Infection Genetics and Evolution, vol. 11, no. 2, pp. 489-495. DOI
Dame, R.T., Kalmykowa, O.J., Grainger, D.C. , Chromosomal macrodomains and associated proteins: implications for DNA organization and replication in gram negative bacteria, Plos Genetics, vol. 7, no. 6, pp. e1002123. DOI
Vermeij, W.P., Alia, A., Backendorf, C. , ROS Quenching Potential of the Epidermal Cornified Cell Envelope, Journal of Investigative Dermatology, vol. 131, no. 7, pp. 1435-1441. DOI
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